STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88874.1Putative queuosine biosynthesis protein QueD; KEGG: eyy:EGYY_03330 1.1e-42 hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase; Psort location: Cytoplasmic, score: 7.50. (140 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I; KEGG: ols:Olsu_0100 3.1e-47 GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.968
KXG88902.1
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
  
 
 0.868
KXG89406.1
KEGG: hdn:Hden_2415 4.5e-46 dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 7.50.
    
 0.707
KXG88875.1
KEGG: ols:Olsu_1445 3.5e-62 DNA polymerase III, delta prime subunit K02341; Psort location: Cytoplasmic, score: 9.97.
       0.689
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.508
KXG90857.1
Metallo-beta-lactamase domain protein; KEGG: dth:DICTH_1660 4.4e-48 nitric oxide reductase; Psort location: Cytoplasmic, score: 9.97.
     
 0.506
thrS
threonine--tRNA ligase; KEGG: ols:Olsu_0800 9.5e-259 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.500
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
     
 0.495
cysS
cysteine--tRNA ligase; KEGG: apv:Apar_1181 1.6e-192 cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.491
KXG88533.1
Hydrolase, NUDIX family; KEGG: ols:Olsu_0031 3.5e-55 NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 7.50.
    
  0.465
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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