STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88891.1KEGG: apb:SAR116_0960 5.4e-27 ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00. (287 aa)    
Predicted Functional Partners:
KXG88890.1
KEGG: ols:Olsu_1490 4.4e-96 amino acid ABC transporter ATP-binding protein; K10008 glutamate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 0.999
KXG88892.1
ABC transporter, permease protein; KEGG: llm:llmg_1942 1.3e-18 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.999
KXG90849.1
KEGG: aur:HMPREF9243_1447 2.3e-81 glnQ_2; glutamine ABC transporter ATP-binding protein GlnQ; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 0.997
KXG88893.1
Tat pathway signal sequence domain protein; KEGG: bde:BDP_0690 3.9e-21 glnH; glutamine-binding protein glnH K02030.
 
 0.995
KXG90848.1
ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 8.6e-52 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 9.51.
 
0.773
KXG88862.1
Hypothetical protein; KEGG: ade:Adeh_2102 5.1e-08 histidine kinase; Psort location: Cytoplasmic, score: 7.50.
 
 0.605
KXG88889.1
Putative ATP-dependent DNA helicase PcrA; KEGG: ols:Olsu_1470 1.8e-273 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
       0.518
KXG89331.1
ABC transporter, ATP-binding protein; KEGG: taz:TREAZ_1964 5.5e-73 macrolide export ATP-binding/permease MacB K02003; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
 0.468
KXG91299.1
ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0014 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.438
KXG89344.1
ABC transporter, ATP-binding protein; KEGG: ols:Olsu_1166 1.0e-160 ABC transporter; K02010 iron(III) transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
 0.427
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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