STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88383.1Repeat protein; KEGG: btl:BALH_2309 5.1e-09 bacillolysin K01400; Psort location: Cellwall, score: 9.98. (755 aa)    
Predicted Functional Partners:
KXG89171.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: lif:LINJ_16_1550 8.1e-30 putative kinesin; Psort location: Cellwall, score: 9.99.
  
 
 0.875
KXG89306.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: dwi:Dwil_GK22102 1.4e-39 GK22102 gene product from transcript GK22102-RA; K00907 myosin-light-chain kinase; Psort location: Cellwall, score: 9.39.
 
   
 0.778
KXG89312.1
GA module; KEGG: dme:Dmel_CG18255 2.2e-23 Strn-Mlck; Stretchin-Mlck K00907; Psort location: Cellwall, score: 9.39.
  
     0.770
KXG90204.1
DNA-binding helix-turn-helix protein; KEGG: pva:Pvag_1772 0.00012 prpA; LexA repressor; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.736
KXG90606.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.732
KXG91335.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.1e-106 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.728
KXG88872.1
Hypothetical protein; KEGG: ols:Olsu_1441 9.3e-94 glucan 1,3-beta-glucosidase; K01210 glucan 1,3-beta-glucosidase; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.721
KXG90489.1
Cobalt transport protein; KEGG: bde:BDP_1327 2.1e-103 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.60.
 
  
 0.714
KXG88425.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: cfa:491027 8.7e-11 CDK12, CRKRS; cyclin-dependent kinase 12; K08819 cyclin-dependent kinase 12/13; Psort location: Cellwall, score: 10.00.
  
 0.714
KXG88598.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.657
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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