STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88386.1ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 6.5e-54 sulfate-transporting ATPase; Psort location: CytoplasmicMembrane, score: 8.78. (301 aa)    
Predicted Functional Partners:
KXG91296.1
KEGG: fma:FMG_0024 7.5e-53 putative zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 
0.917
KXG89344.1
ABC transporter, ATP-binding protein; KEGG: ols:Olsu_1166 1.0e-160 ABC transporter; K02010 iron(III) transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
0.912
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.866
KXG90493.1
KEGG: gvg:HMPREF0421_21025 2.4e-102 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 
0.863
KXG88890.1
KEGG: ols:Olsu_1490 4.4e-96 amino acid ABC transporter ATP-binding protein; K10008 glutamate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 
0.830
KXG90848.1
ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 8.6e-52 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 9.51.
    
 0.790
KXG88387.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.789
KXG90570.1
ABC transporter, ATP-binding protein; KEGG: bde:BDP_0608 1.6e-73 livG; branched-chain amino acid transport ATP-binding protein livG K01995; Psort location: CytoplasmicMembrane, score: 8.78.
   
 
0.774
KXG90823.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3442 8.5e-84 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.768
KXG90824.1
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_0117 1.2e-79 yfiB1; lipid A export ATP-binding/permease protein msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.760
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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