STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88450.1Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 1.1e-09 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 7.50. (296 aa)    
Predicted Functional Partners:
KXG91426.1
Transcriptional regulator, DeoR family; KEGG: pfe:PSF113_4579 7.2e-16 glycerol-3-phosphate regulon repressor, DeoR family K02444.
  
     0.775
KXG88471.1
Transcriptional regulator, DeoR family; KEGG: pfe:PSF113_5905 1.7e-16 glmR; protein GlmR; Psort location: Cytoplasmic, score: 7.50.
  
     0.775
KXG90329.1
Transcriptional regulator, DeoR family; KEGG: hip:CGSHiEE_02055 1.6e-25 fucI; L-fucose isomerase K02430.
  
     0.774
KXG88867.1
Transcriptional regulator, DeoR family; KEGG: pfe:PSF113_5905 9.9e-19 glmR; protein GlmR.
  
     0.774
KXG90306.1
Phosphotransferase system, EIIC; KEGG: efa:EF0694 2.0e-130 PTS system fructose-specific transporter subunit IIBC; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.595
KXG90307.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: ols:Olsu_0535 2.6e-50 PTS system D-fructose-specific IIA component (F1P-forming), Frc family; K02768 PTS system, fructose-specific IIA component; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.595
KXG88449.1
Hypothetical protein.
       0.547
KXG89396.1
KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.465
KXG88544.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: apv:Apar_1286 1.8e-33 putative PTS IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.407
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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