STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88457.1HAD hydrolase, family IIB; KEGG: apo:Arcpr_0814 4.3e-05 SPP-like hydrolase K07024. (326 aa)    
Predicted Functional Partners:
KXG88456.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; KEGG: ols:Olsu_1685 2.8e-108 UDP-N-acetylmuramyl tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Psort location: Cytoplasmic, score: 7.50; Belongs to the MurCDEF family. MurE subfamily.
 
     0.812
KXG91012.1
4Fe-4S binding domain protein; KEGG: mru:mru_0830 3.5e-09 ferredoxin; K00205 formylmethanofuran dehydrogenase subunit F; Psort location: Cytoplasmic, score: 7.50.
  
    0.750
KXG90800.1
STAS domain protein; KEGG: cni:Calni_0067 9.3e-10 anti-sigma regulatory factor, serine/threonine protein kinase; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50; Belongs to the anti-sigma-factor antagonist family.
  
  
  0.713
KXG90326.1
Hypothetical protein; KEGG: cgo:Corgl_0997 1.3e-25 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase; Psort location: Cytoplasmic, score: 7.50.
  
     0.709
KXG91336.1
Hypothetical protein; KEGG: cjk:jk0707 0.0084 aceF; dihydrolipoamide acetyltransferase K00658; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.696
KXG90773.1
Tetratricopeptide repeat protein; KEGG: sur:STAUR_2179 4.4e-09 Ser/Thr kinase family protein.
  
     0.684
KXG88815.1
Hypothetical protein; KEGG: nde:NIDE2025 1.7e-09 putative serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.663
KXG90784.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.652
KXG91367.1
Transcriptional regulator, MerR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.649
rbsK-3
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 0.628
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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