STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXG88461.1FG-GAP repeat protein; KEGG: npu:Npun_F1457 2.1e-21 outer membrane adhesin-like protein; Psort location: CytoplasmicMembrane, score: 9.36. (1187 aa)    
Predicted Functional Partners:
KXG89171.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: lif:LINJ_16_1550 8.1e-30 putative kinesin; Psort location: Cellwall, score: 9.99.
  
 
 0.717
KXG91335.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.1e-106 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.670
KXG88460.1
Hypothetical protein.
       0.615
KXG88425.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: cfa:491027 8.7e-11 CDK12, CRKRS; cyclin-dependent kinase 12; K08819 cyclin-dependent kinase 12/13; Psort location: Cellwall, score: 10.00.
 
 
 0.612
KXG89330.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 3.2e-94 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.611
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
    
 
 0.540
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.535
KXG88506.1
Sporulation initiation inhibitor protein Soj; KEGG: nmh:NMBH4476_0189 5.0e-63 chromosome partitioning protein, ParA family K03496; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
 0.521
KXG90628.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
    
   0.519
KXG90853.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.506
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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