STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88465.1Putative hexulose-6-phosphate isomerase; KEGG: lca:LSEI_2733 1.3e-96 putative L-xylulose 5-phosphate 3-epimerase; K03082 hexulose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 7.50. (285 aa)    
Predicted Functional Partners:
KXG88466.1
Putative 3-dehydro-L-gulonate-6-phosphate decarboxylase; KEGG: ehr:EHR_13085 2.2e-78 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
 
 0.998
KXG88464.1
KEGG: efu:HMPREF0351_11028 2.9e-74 araD; L-ribulose-5-phosphate 4-epimerase K01786; Psort location: Cytoplasmic, score: 7.50.
   
 0.990
KXG89736.1
Putative L-ribulose-5-phosphate 4-epimerase; KEGG: hor:Hore_18470 4.2e-43 L-fuculose phosphate aldolase K01628; Psort location: Cytoplasmic, score: 7.50.
   
 0.930
KXG88468.1
Putative sugar-specific permease, SgaT/UlaA; KEGG: efc:EFAU004_01271 3.7e-186 PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.845
KXG88470.1
Hypothetical protein; KEGG: lca:LSEI_2739 4.2e-130 putative L-ascorbate 6-phosphate lactonase; K03476 L-ascorbate 6-phosphate lactonase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.839
KXG88467.1
Phosphotransferase enzyme II, B component SgaB family protein; KEGG: lmm:MI1_08725 2.0e-20 PTS system galactitol-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component.
 
  
 0.813
KXG88469.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: efc:EFAU004_01272 5.3e-36 PTS system ascorbate-specific transporter subunit IIA K02821; Psort location: Cytoplasmic, score: 7.50.
 
     0.467
KXG88463.1
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: apv:Apar_1219 0. putative phosphoketolase K01632; Psort location: Cytoplasmic, score: 7.50.
       0.435
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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