STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88480.1Penicillin-binding protein, transpeptidase domain protein; KEGG: ols:Olsu_1757 0. peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family. (962 aa)    
Predicted Functional Partners:
KXG90284.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
 
 
 0.995
KXG88479.1
Protein phosphatase 2C; KEGG: ols:Olsu_1756 4.7e-138 protein serine/threonine phosphatase K01090; Psort location: Cytoplasmic, score: 7.50.
  
 0.979
KXG88482.1
Kinase domain protein; KEGG: ols:Olsu_1758 1.4e-209 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.957
KXG88478.1
FHA domain protein; KEGG: npu:Npun_F1117 8.6e-09 forkhead-associated protein; Psort location: CytoplasmicMembrane, score: 8.16.
 
   
 0.956
KXG88477.1
FHA domain protein; KEGG: rca:Rcas_2253 3.7e-05 adenylate cyclase; K01768 adenylate cyclase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.943
KXG90276.1
Putative cell division protein FtsL; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.934
KXG90876.1
Penicillin-binding protein, 1A family; KEGG: cgo:Corgl_1294 3.3e-153 penicillin-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
0.903
KXG90775.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.868
KXG90278.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.
 
 
 0.865
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.853
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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