STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88488.1KEGG: fsc:FSU_2175 3.3e-137 heavy metal translocating P-type ATPase; Psort location: CytoplasmicMembrane, score: 8.78. (703 aa)    
Predicted Functional Partners:
KXG89564.1
Copper-exporting ATPase; KEGG: ols:Olsu_1341 2.3e-145 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.897
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.648
KXG88489.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.606
KXG88486.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cby:CLM_2346 2.8e-46 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.442
KXG88487.1
Response regulator receiver domain protein; KEGG: bbp:BBPR_1604 2.5e-29 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
     
 0.436
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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