close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88512.1Hypothetical protein. (394 aa)    
Predicted Functional Partners:
KXG88491.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: apv:Apar_1348 1.2e-116 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.933
KXG89330.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 3.2e-94 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.822
KXG90801.1
Stage II sporulation protein E; KEGG: awo:Awo_c32270 5.0e-23 phosphoprotein phosphatase K07315; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.819
KXG88350.1
KEGG: ols:Olsu_1566 2.5e-148 ribose-phosphate pyrophosphokinase K00948; Psort location: Cytoplasmic, score: 9.97.
   
 0.804
KXG90691.1
Putative transcriptional regulatory protein WalR; KEGG: fal:FRAAL1628 2.5e-38 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
   
 0.737
KXG89566.1
Transcriptional regulatory protein; KEGG: bbp:BBPR_1604 4.9e-17 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
   
 0.737
KXG89133.1
KEGG: rha:RHA1_ro05622 4.0e-38 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
   
 0.737
KXG88487.1
Response regulator receiver domain protein; KEGG: bbp:BBPR_1604 2.5e-29 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
   
 0.737
KXG88492.1
Putative sensory transduction protein RegX3; KEGG: npu:Npun_F4214 1.3e-50 two component transcriptional regulator K07657; Psort location: Cytoplasmic, score: 9.97.
   
 0.737
KXG88595.1
Putative DNA-binding response regulator MtrA; KEGG: npu:Npun_F5788 3.8e-33 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
   
 0.737
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.