Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXG88532.1EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 7.50. (311 aa)    
Predicted Functional Partners:
KXG90748.1
DAK2 domain fusion protein YloV; KEGG: efu:HMPREF0351_10092 8.9e-89 dhaK; glycerone kinase K07030; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.880
KXG88885.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 1.1e-17 DegV-like protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.735
KXG88854.1
EDD domain protein, DegV family.
  
     0.720
KXG89360.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 6.3e-09 DegV-like protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.636
KXG90746.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.595
purD
KEGG: aur:HMPREF9243_0942 8.1e-95 purD; phosphoribosylamine--glycine ligase K01945; Psort location: Cytoplasmic, score: 7.50; Belongs to the GARS family.
 
      0.591
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.554
KXG88533.1
Hydrolase, NUDIX family; KEGG: ols:Olsu_0031 3.5e-55 NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.450
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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