STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88538.1KEGG: bde:BDP_1303 5.4e-153 peptidase family M20A protein. (457 aa)    
Predicted Functional Partners:
KXG91012.1
4Fe-4S binding domain protein; KEGG: mru:mru_0830 3.5e-09 ferredoxin; K00205 formylmethanofuran dehydrogenase subunit F; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.824
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 
 0.662
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.618
KXG88832.1
Membrane alanyl aminopeptidase; KEGG: ljo:LJ1584 1.1e-257 aminopeptidase N; K01256 aminopeptidase N; Psort location: Cytoplasmic, score: 9.97.
  
 0.587
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.558
KXG89576.1
Hypothetical protein; KEGG: ols:Olsu_0702 4.1e-14 amidohydrolase; K01950 NAD+ synthase (glutamine-hydrolysing).
   
 0.558
pyrD
Putative dihydroorotate oxidase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.518
KXG90825.1
KEGG: rdn:HMPREF0733_11412 9.9e-138 ABC transporter ATP-binding protein; Psort location: Cytoplasmic, score: 9.97.
 
 
   0.516
KXG88537.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: fma:FMG_1490 1.5e-63 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.51; Belongs to the peptidase S11 family.
  
    0.507
KXG91306.1
Putative dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 
 0.494
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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