STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88545.1Hypothetical protein; KEGG: apv:Apar_1285 2.5e-22 PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component. (79 aa)    
Predicted Functional Partners:
KXG88546.1
KEGG: bmd:BMD_1029 2.4e-86 putative sugar-specific permease K03475; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.994
KXG88544.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: apv:Apar_1286 1.8e-33 putative PTS IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.862
KXG88447.1
Putative sugar-specific permease, SgaT/UlaA; KEGG: sax:USA300HOU_0350 6.9e-114 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.800
KXG88468.1
Putative sugar-specific permease, SgaT/UlaA; KEGG: efc:EFAU004_01271 3.7e-186 PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.800
KXG88469.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: efc:EFAU004_01272 5.3e-36 PTS system ascorbate-specific transporter subunit IIA K02821; Psort location: Cytoplasmic, score: 7.50.
   
 
  0.796
KXG88470.1
Hypothetical protein; KEGG: lca:LSEI_2739 4.2e-130 putative L-ascorbate 6-phosphate lactonase; K03476 L-ascorbate 6-phosphate lactonase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.785
KXG88814.1
KEGG: sri:SELR_26700 9.5e-14 hpr; putative phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 10.00.
    
  0.778
KXG88547.1
Putative dihydrodipicolinate synthase; KEGG: cgo:Corgl_1546 2.6e-66 dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapA family.
       0.508
KXG88543.1
SIS domain protein; KEGG: apv:Apar_1282 2.0e-82 sugar isomerase (SIS); K06041 arabinose-5-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 9.55.
       0.499
KXG91418.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: ols:Olsu_0066 1.2e-38 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: Cytoplasmic, score: 7.50.
   
 
  0.440
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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