STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88557.1Thioredoxin; KEGG: cdp:CD241_2253 2.1e-25 trxC; thioredoxin K03671; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family. (105 aa)    
Predicted Functional Partners:
KXG89189.1
Putative alkyl hydroperoxide reductase F subunit; KEGG: apv:Apar_0907 1.2e-164 thioredoxin-disulfide reductase K00384; Psort location: Cytoplasmic, score: 9.97.
 
 0.994
KXG91363.1
Putative thioredoxin-disulfide reductase; KEGG: ols:Olsu_0945 2.1e-80 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.97.
 
 0.969
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.829
KXG89190.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.814
KXG90814.1
KEGG: bpb:bpr_I2050 3.2e-155 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.811
KXG89468.1
KEGG: ddf:DEFDS_1775 6.1e-122 translation elongation factor G K02355; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.744
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
    
 
 0.744
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
   
 0.739
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.721
htpG
Hsp90 protein; Molecular chaperone. Has ATPase activity.
  
 
 0.713
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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