STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88567.1Hypothetical protein; KEGG: mma:MM_0211 7.6e-11 cysteine proteinase; K01376. (968 aa)    
Predicted Functional Partners:
KXG90879.1
Hypothetical protein.
  
     0.749
KXG90772.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.743
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
 0.724
KXG88815.1
Hypothetical protein; KEGG: nde:NIDE2025 1.7e-09 putative serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.707
KXG91336.1
Hypothetical protein; KEGG: cjk:jk0707 0.0084 aceF; dihydrolipoamide acetyltransferase K00658; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.693
KXG90315.1
Acetyltransferase, GNAT family; KEGG: rho:RHOM_09780 1.3e-11 tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.678
KXG89579.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.655
KXG89529.1
Hypothetical protein; KEGG: sgg:SGGBAA2069_c09080 1.7e-30 tanA1; tannase.
  
 
 0.629
KXG90326.1
Hypothetical protein; KEGG: cgo:Corgl_0997 1.3e-25 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase; Psort location: Cytoplasmic, score: 7.50.
  
     0.608
KXG90890.1
KEGG: bbb:BIF_02005 5.3e-107 Carboxypeptidase S1; Psort location: CytoplasmicMembrane, score: 9.55.
  
 0.578
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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