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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88585.1MazG family protein; KEGG: amc:MADE_1004050 1.4e-37 MazG protein; K04765 ATP diphosphatase; Psort location: Cytoplasmic, score: 7.50. (327 aa)    
Predicted Functional Partners:
KXG90801.1
Stage II sporulation protein E; KEGG: awo:Awo_c32270 5.0e-23 phosphoprotein phosphatase K07315; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.912
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.900
KXG88491.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: apv:Apar_1348 1.2e-116 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
    
  0.898
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
     
 0.831
KXG89413.1
KEGG: ols:Olsu_0092 4.2e-75 hypoxanthine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
  0.826
KXG91087.1
Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.821
cmk
Cytidylate kinase; KEGG: ols:Olsu_0916 2.2e-101 cytidylate kinase; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.820
KXG91340.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 2.3e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the CinA family.
  
  
  0.807
KXG90578.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
     
 0.803
folE
GTP cyclohydrolase I; KEGG: ols:Olsu_0100 3.1e-47 GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 7.50.
    
 0.800
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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