STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88595.1Putative DNA-binding response regulator MtrA; KEGG: npu:Npun_F5788 3.8e-33 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97. (253 aa)    
Predicted Functional Partners:
KXG88594.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 3.1e-173 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
KXG88491.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: apv:Apar_1348 1.2e-116 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
 0.975
KXG90690.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eel:EUBELI_01630 1.1e-104 two-component system OmpR family sensor kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; Psort location: CytoplasmicMembrane, score: 8.78.
 0.939
KXG89132.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ova:OBV_00440 1.3e-48 putative two-component histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
 0.914
KXG88598.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.887
KXG88596.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_3847 2.0e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 0.881
KXG90801.1
Stage II sporulation protein E; KEGG: awo:Awo_c32270 5.0e-23 phosphoprotein phosphatase K07315; Psort location: Cytoplasmic, score: 7.50.
  
 0.866
KXG88486.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cby:CLM_2346 2.8e-46 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.812
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.748
KXG88512.1
Hypothetical protein.
   
 0.737
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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