STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88596.1Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_3847 2.0e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78. (266 aa)    
Predicted Functional Partners:
KXG88598.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.958
KXG90569.1
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF; KEGG: dca:Desca_1311 1.4e-76 Fe(3+)-transporting ATPase K01996; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 
0.929
KXG91296.1
KEGG: fma:FMG_0024 7.5e-53 putative zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 
0.909
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.897
KXG88594.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 3.1e-173 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.896
KXG88595.1
Putative DNA-binding response regulator MtrA; KEGG: npu:Npun_F5788 3.8e-33 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.881
KXG89184.1
KEGG: fma:FMG_0226 4.8e-58 zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
0.867
KXG88597.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.840
KXG90848.1
ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 8.6e-52 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 9.51.
   
 0.790
KXG90489.1
Cobalt transport protein; KEGG: bde:BDP_1327 2.1e-103 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.60.
 
 
0.734
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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