STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN74770.1Glycerophosphoryl diester phosphodiesterase. (251 aa)    
Predicted Functional Partners:
SFN74797.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.857
SFN74740.1
Hypothetical protein.
       0.799
SFN74827.1
Putative sensory transduction regulator.
  
    0.789
GlpK
Glycerol kinase; Belongs to the FGGY kinase family.
 
  
 0.772
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.656
SFO64123.1
Glycerol-3-phosphate dehydrogenase.
 
 
 0.552
SFN97140.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.537
PstA
Phosphate ABC transporter membrane protein 2, PhoT family.
  
  
 0.470
SFN74934.1
TIGR00659 family protein.
  
    0.468
SFN74899.1
Putative effector of murein hydrolase LrgA, UPF0299 family.
       0.467
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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