STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN81098.1NTE family protein. (351 aa)    
Predicted Functional Partners:
PhaC
Polyhydroxyalkanoate synthase.
 
   
 0.709
SFO61342.1
Polyhydroxyalkanoate synthase.
 
   
 0.651
SFO50172.1
Polyhydroxyalkanoate synthase.
 
   
 0.628
PhaR
Polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.622
SFO23829.1
3-hydroxybutyrate dehydrogenase.
 
   0.510
PhaZ
Poly(3-hydroxybutyrate) depolymerase.
  
     0.484
SFO75477.1
Uncharacterized membrane protein.
  
     0.437
prfB
Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.433
SFO72703.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
   0.430
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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