STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN93830.1Thiol-disulfide isomerase or thioredoxin. (267 aa)    
Predicted Functional Partners:
DsbD
Thiol:disulfide interchange protein DsbD.
 
 
 0.962
SFN93906.1
Protein-disulfide isomerase.
 
 
 0.835
SFN75432.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 0.832
SFN94843.1
Protein SCO1/2.
 
 
 0.787
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.787
SFN93867.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
  
    0.777
SFN76289.1
Protein SCO1/2.
 
 
 0.762
SFN93725.1
Two-component system, OmpR family, sensor histidine kinase QseC.
 
 
 0.761
SFO89553.1
Cytochrome c-type biogenesis protein.
 
  
 0.756
SFO62346.1
Cytochrome c-type biogenesis protein.
 
  
 0.750
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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