Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ric | SFO00500.1 | SAMN04244567_00637 | SAMN04244567_00631 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Uncharacterized protein involved in response to NO. | 0.634 |
| Ric | SFO00557.1 | SAMN04244567_00637 | SAMN04244567_00632 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Collagenase-like protease, PrtC family. | 0.559 |
| Ric | SFO00596.1 | SAMN04244567_00637 | SAMN04244567_00633 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Putative protease. | 0.617 |
| Ric | SFO00646.1 | SAMN04244567_00637 | SAMN04244567_00634 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Predicted lipid carrier protein YhbT, contains SCP2 domain. | 0.555 |
| Ric | SFO00690.1 | SAMN04244567_00637 | SAMN04244567_00635 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 3-octaprenyl-4hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.773 |
| Ric | ubiX | SAMN04244567_00637 | SAMN04244567_00636 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.773 |
| SFO00500.1 | Ric | SAMN04244567_00631 | SAMN04244567_00637 | Uncharacterized protein involved in response to NO. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.634 |
| SFO00500.1 | SFO00557.1 | SAMN04244567_00631 | SAMN04244567_00632 | Uncharacterized protein involved in response to NO. | Collagenase-like protease, PrtC family. | 0.787 |
| SFO00500.1 | SFO00596.1 | SAMN04244567_00631 | SAMN04244567_00633 | Uncharacterized protein involved in response to NO. | Putative protease. | 0.781 |
| SFO00500.1 | SFO00646.1 | SAMN04244567_00631 | SAMN04244567_00634 | Uncharacterized protein involved in response to NO. | Predicted lipid carrier protein YhbT, contains SCP2 domain. | 0.806 |
| SFO00500.1 | SFO00690.1 | SAMN04244567_00631 | SAMN04244567_00635 | Uncharacterized protein involved in response to NO. | 3-octaprenyl-4hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.508 |
| SFO00500.1 | ubiX | SAMN04244567_00631 | SAMN04244567_00636 | Uncharacterized protein involved in response to NO. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.498 |
| SFO00557.1 | Ric | SAMN04244567_00632 | SAMN04244567_00637 | Collagenase-like protease, PrtC family. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.559 |
| SFO00557.1 | SFO00500.1 | SAMN04244567_00632 | SAMN04244567_00631 | Collagenase-like protease, PrtC family. | Uncharacterized protein involved in response to NO. | 0.787 |
| SFO00557.1 | SFO00596.1 | SAMN04244567_00632 | SAMN04244567_00633 | Collagenase-like protease, PrtC family. | Putative protease. | 0.996 |
| SFO00557.1 | SFO00646.1 | SAMN04244567_00632 | SAMN04244567_00634 | Collagenase-like protease, PrtC family. | Predicted lipid carrier protein YhbT, contains SCP2 domain. | 0.976 |
| SFO00557.1 | SFO00690.1 | SAMN04244567_00632 | SAMN04244567_00635 | Collagenase-like protease, PrtC family. | 3-octaprenyl-4hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.732 |
| SFO00557.1 | SFO00933.1 | SAMN04244567_00632 | SAMN04244567_00641 | Collagenase-like protease, PrtC family. | NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator. | 0.516 |
| SFO00557.1 | SFO01131.1 | SAMN04244567_00632 | SAMN04244567_00646 | Collagenase-like protease, PrtC family. | Copper chaperone NosL. | 0.495 |
| SFO00557.1 | SFO30666.1 | SAMN04244567_00632 | SAMN04244567_01342 | Collagenase-like protease, PrtC family. | Uncharacterized protein involved in response to NO. | 0.463 |
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