Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CysD | SFO15649.1 | SAMN04244567_00545 | SAMN04244567_00910 | Sulfate adenylyltransferase subunit 2. | Sulfate adenylyltransferase. | 0.999 |
CysD | SFO17398.1 | SAMN04244567_00545 | SAMN04244567_00960 | Sulfate adenylyltransferase subunit 2. | Protein of unknown function. | 0.466 |
CysD | SFO17423.1 | SAMN04244567_00545 | SAMN04244567_00961 | Sulfate adenylyltransferase subunit 2. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.993 |
CysD | SFO17458.1 | SAMN04244567_00545 | SAMN04244567_00962 | Sulfate adenylyltransferase subunit 2. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.918 |
CysD | SFO40463.1 | SAMN04244567_00545 | SAMN04244567_01651 | Sulfate adenylyltransferase subunit 2. | Cysteine synthase A. | 0.677 |
CysD | SFP00177.1 | SAMN04244567_00545 | SAMN04244567_03592 | Sulfate adenylyltransferase subunit 2. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.777 |
CysD | SFP01921.1 | SAMN04244567_00545 | SAMN04244567_03632 | Sulfate adenylyltransferase subunit 2. | Cysteine synthase A. | 0.677 |
CysD | cysN | SAMN04244567_00545 | SAMN04244567_00544 | Sulfate adenylyltransferase subunit 2. | Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
CysD | metZ | SAMN04244567_00545 | SAMN04244567_00397 | Sulfate adenylyltransferase subunit 2. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.420 |
SFO15649.1 | CysD | SAMN04244567_00910 | SAMN04244567_00545 | Sulfate adenylyltransferase. | Sulfate adenylyltransferase subunit 2. | 0.999 |
SFO15649.1 | SFO17423.1 | SAMN04244567_00910 | SAMN04244567_00961 | Sulfate adenylyltransferase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.994 |
SFO15649.1 | SFO17458.1 | SAMN04244567_00910 | SAMN04244567_00962 | Sulfate adenylyltransferase. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.983 |
SFO15649.1 | SFO40463.1 | SAMN04244567_00910 | SAMN04244567_01651 | Sulfate adenylyltransferase. | Cysteine synthase A. | 0.694 |
SFO15649.1 | SFP00177.1 | SAMN04244567_00910 | SAMN04244567_03592 | Sulfate adenylyltransferase. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.989 |
SFO15649.1 | SFP01921.1 | SAMN04244567_00910 | SAMN04244567_03632 | Sulfate adenylyltransferase. | Cysteine synthase A. | 0.694 |
SFO15649.1 | SseA | SAMN04244567_00910 | SAMN04244567_00988 | Sulfate adenylyltransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.515 |
SFO15649.1 | cysN | SAMN04244567_00910 | SAMN04244567_00544 | Sulfate adenylyltransferase. | Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
SFO15649.1 | metZ | SAMN04244567_00910 | SAMN04244567_00397 | Sulfate adenylyltransferase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.654 |
SFO17398.1 | CysD | SAMN04244567_00960 | SAMN04244567_00545 | Protein of unknown function. | Sulfate adenylyltransferase subunit 2. | 0.466 |
SFO17398.1 | SFO17423.1 | SAMN04244567_00960 | SAMN04244567_00961 | Protein of unknown function. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.982 |
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