STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO20832.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
CcoG
Cytochrome c oxidase accessory protein FixG.
   
    0.926
SFO75497.1
Hypothetical protein.
   
    0.926
CcoP
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
    0.842
SFN82561.1
Cytochrome c oxidase cbb3-type subunit 4.
   
    0.716
CcoO
Cytochrome c oxidase cbb3-type subunit 2.
   
    0.716
SFO75328.1
Outer membrane protein.
   
    0.704
CcoN
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
   
    0.652
SFN81996.1
Polyphosphate kinase 2, PA0141 family.
   
    0.600
Ppk2
Polyphosphate kinase 2, PA0141 family.
   
    0.600
Ppk2-2
Polyphosphate kinase 2, PA0141 family.
   
    0.600
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.