STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO23667.1(2S)-methylsuccinyl-CoA dehydrogenase. (551 aa)    
Predicted Functional Partners:
SFO10061.1
L-erythro-3-methylmalyl-CoA dehydratase.
 
 0.985
SFO81008.1
(R)-ethylmalonyl-CoA mutase.
 
 
 0.969
SFO24187.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.875
CcrA
crotonyl-CoA carboxylase/reductase.
 
 
 0.799
SFO22961.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.761
SFO56989.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.761
SFO23871.1
enoyl-CoA hydratase.
  
 0.721
SFO69827.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.721
SFO89517.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.721
SFO22361.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.689
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
Server load: low (16%) [HD]