STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO43666.1phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (258 aa)    
Predicted Functional Partners:
SFO43687.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SFO43649.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.997
SFO68338.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 0.988
SFO43629.1
Cholesterol transport system auxiliary component.
 
    0.963
MlaD
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.957
SFO51048.1
ABC-2 type transport system permease protein.
   
  0.932
SFO68321.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
  
 
0.905
SFO91186.1
Peptide/nickel transport system ATP-binding protein.
 
     
0.897
SFO72852.1
Phospholipid transport system substrate-binding protein.
  
 
 0.860
SFO37630.1
ABC-2 type transport system ATP-binding protein.
  
 
0.760
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.