STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO44025.1Sirohydrochlorin ferrochelatase. (235 aa)    
Predicted Functional Partners:
SFO44047.1
Protein of unknown function.
     0.971
SFO44068.1
NnrU protein.
 
     0.736
CbiE
precorrin-6Y C5,15-methyltransferase (decarboxylating).
     
 0.728
SFO15649.1
Sulfate adenylyltransferase.
  
  
 0.685
SFO06324.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
    0.676
SFO06440.1
Transcriptional regulator, AsnC family.
 
    0.625
cysN
Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.620
SFN75728.1
Outer membrane protein OmpU.
  
     0.619
SFO05186.1
precorrin-3B synthase.
 
  
 0.572
SFO06462.1
Protein NirF.
 
    0.541
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.