STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HspQHeat shock protein HspQ. (110 aa)    
Predicted Functional Partners:
SFN70037.1
Protein of unknown function.
 
     0.712
SFO92369.1
GcrA cell cycle regulator.
  
     0.539
SFN72402.1
NlpC/P60 family protein.
  
     0.518
SFO62940.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
  
     0.511
SFO34886.1
NifU homolog involved in Fe-S cluster formation.
  
   
 0.439
SFN73301.1
Hypothetical protein.
       0.430
SFO43248.1
UDP-glucose pyrophosphorylase.
      
 0.424
SFO15875.1
Hypothetical protein.
  
   
 0.423
SFO34992.1
Protein of unknown function.
  
     0.418
SFO75080.1
Predicted N-acetyltransferase YhbS.
  
     0.413
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.