STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO46568.1Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. (1544 aa)    
Predicted Functional Partners:
SFO46536.1
Acyl transferase domain-containing protein.
0.999
SFO46586.1
4'-phosphopantetheinyl transferase EntD (siderophore biosynthesis).
 
 
 0.990
SFO47980.1
Enterobactin synthetase component F.
 0.980
SFO46553.1
Hypothetical protein.
 
    0.956
SFO30211.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
0.952
SFO79003.1
Aryl carrier domain-containing protein.
  
  
 0.932
SFO40585.1
malonyl-CoA/methylmalonyl-CoA synthetase.
 
 
0.921
SFO46516.1
Hypothetical protein.
 
     0.912
SFN70092.1
Enterobactin synthetase component F.
 
0.906
SFO52031.1
Predicted dehydrogenase.
 
   
 0.899
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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