STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO49999.1Response regulator receiver domain-containing protein. (121 aa)    
Predicted Functional Partners:
SFO31343.1
PAS/PAC sensor signal transduction histidine kinase.
 0.991
SFO50015.1
Na+/proline symporter.
 
 0.962
SFO49982.1
DNA polymerase-3 subunit epsilon.
 
 
 0.888
SFO84723.1
Signal transduction histidine kinase.
 
 0.849
SFO65539.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.840
SFP16052.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.836
SFO51958.1
Two-component system, OmpR family, sensor histidine kinase TctE.
 
 
 0.801
SFO50046.1
CBS domain-containing protein.
  
    0.788
SFO50028.1
Hypothetical protein.
       0.778
SFN93725.1
Two-component system, OmpR family, sensor histidine kinase QseC.
 
 
 0.759
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.