STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO56153.1fatty-acyl-CoA synthase. (499 aa)    
Predicted Functional Partners:
SFP12703.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
0.885
SFO46568.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
 
0.856
SFO56175.1
MaoC like domain-containing protein.
  
 
 0.811
SFO56219.1
Uncharacterized domain 1-containing protein.
     
 0.784
SFO56197.1
Hypothetical protein.
       0.773
SFO56671.1
AMP-binding enzyme.
  
     0.768
SFP14097.1
AMP-binding enzyme C-terminal domain-containing protein.
  
     0.748
SFO46536.1
Acyl transferase domain-containing protein.
 
 0.732
FabD
[Acyl-carrier-protein] S-malonyltransferase.
 
  
 0.637
SFO47980.1
Enterobactin synthetase component F.
 
 
 0.633
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.