STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO56769.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (267 aa)    
Predicted Functional Partners:
SFO56860.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.933
SFO23960.1
2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase.
  
  
 
0.922
menB
2-ketocyclohexanecarboxyl-CoA hydrolase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
   
 
 0.904
SFO56822.1
Acyl dehydratase.
 
 0.890
SFO56840.1
Rieske [2Fe-2S] domain-containing protein.
 
  
 0.890
SFO56788.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
 0.841
SFO56805.1
Hypothetical protein.
  
    0.775
SFO83916.1
7-alpha-hydroxysteroid dehydrogenase.
  
     0.766
SFO41215.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.728
SFO60323.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
    0.681
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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