STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO60169.1TonB-dependent Receptor Plug Domain. (149 aa)    
Predicted Functional Partners:
SFO78679.1
TonB dependent receptor.
  
 0.980
SFN70092.1
Enterobactin synthetase component F.
 
  
 0.731
SFO79003.1
Aryl carrier domain-containing protein.
  
  
 0.724
SFO47980.1
Enterobactin synthetase component F.
  
  
 0.675
SFO73536.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
  
 0.664
SFN97986.1
PKHD-type hydroxylase.
 
  
 0.661
SFO60151.1
AraC-type DNA-binding protein.
 
     0.588
SFP28008.1
Iron complex transport system substrate-binding protein.
 
  
 0.562
SFO78796.1
Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.539
SFO92276.1
Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.518
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.