STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO65638.1Transcriptional regulator, AsnC family. (165 aa)    
Predicted Functional Partners:
LpdA-3
Dihydrolipoamide dehydrogenase.
  
  
 0.559
SFO65665.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
     
 0.551
SFO65681.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
     
 0.550
SFO65696.1
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
  
    0.544
SFO65652.1
Hypothetical protein.
       0.542
SFO65727.1
Adenosylcobinamide hydrolase.
       0.416
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.