STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO66598.1Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (252 aa)    
Predicted Functional Partners:
SFO66647.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
SFO24048.1
Branched-chain amino acid transport system permease protein.
 
 0.987
SFO66613.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
0.976
SFO76058.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.974
SFO71081.1
Branched-chain amino acid transport system permease protein.
 
 0.969
SFO66631.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
SFO55987.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 0.959
SFO66583.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.957
SFO50262.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.955
SFO24025.1
Branched-chain amino acid transport system permease protein.
 
 0.931
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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