STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO75344.13-methylcrotonyl-CoA carboxylase beta subunit. (534 aa)    
Predicted Functional Partners:
SFO75379.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
 0.999
SFO68479.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 0.995
SFO75442.1
methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.994
AccC-2
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.988
SFO75266.1
isovaleryl-CoA dehydrogenase.
 
 0.986
SFO22961.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.950
SFO75411.1
hydroxymethylglutaryl-CoA lyase.
 
 0.947
SFO21463.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.937
SFO35932.1
Carbamoyl-phosphate synthase L chain, ATP binding domain.
 
 0.936
SFO88882.1
Carbamoyl-phosphate synthase L chain, ATP binding domain.
 
 0.936
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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