STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO78046.1Polar amino acid transport system substrate-binding protein. (290 aa)    
Predicted Functional Partners:
SFO78065.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 0.988
SFO78086.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.967
SFO78107.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.931
SFO25783.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 
 0.825
SFP14606.1
Polar amino acid transport system permease protein.
 
 0.821
SFO25747.1
Polar amino acid transport system permease protein.
 
 0.818
SFO50624.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.815
SFP14636.1
Polar amino acid transport system permease protein.
 
 0.810
SFO50605.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.802
SFO50559.1
Polar amino acid transport system ATP-binding protein.
 0.800
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.