STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO97098.1(S)-ureidoglycine aminohydrolase. (256 aa)    
Predicted Functional Partners:
SFO97063.1
Allantoate deiminase.
 
  
 0.830
SFO91914.1
Ureidoglycolate lyase.
 
     0.692
SFP13416.1
Nucleobase:cation symporter-1, NCS1 family.
 
     0.645
UraH
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.595
SFO97017.1
Peptide/nickel transport system substrate-binding protein.
       0.515
SFO31977.1
Uncharacterized membrane protein.
 
     0.475
SFO97130.1
Transcriptional regulator, RpiR family.
       0.459
XdhA
Xanthine dehydrogenase small subunit.
 
     0.413
XdhB
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
   
 0.411
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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