STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP07676.1Ribose transport system substrate-binding protein. (319 aa)    
Predicted Functional Partners:
SFP07715.1
Ribose transport system permease protein.
 
 0.971
SFP07755.1
Ribose transport system ATP-binding protein.
 
 0.944
SFO65874.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.903
SFO65859.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.878
SFO14070.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.873
SFN75128.1
Hypothetical protein.
 
 0.871
SFP07977.1
Inositol transport system permease protein.
 
 0.863
SFP07610.1
Branched-chain amino acid transport system / permease component.
 
 0.854
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-); Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.795
SFO14101.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.787
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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