STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP15194.1FAD/FMN-containing dehydrogenase. (465 aa)    
Predicted Functional Partners:
SFP15160.1
Aldehyde dehydrogenase family protein.
     
 0.776
GlcF
Glycolate oxidase iron-sulfur subunit.
 
 0.728
SFP15226.1
Acetolactate synthase-1/2/3 large subunit.
   
 
 0.562
SFP15322.1
Aspartate aminotransferase.
  
  
 0.536
SFP15351.1
Uronate dehydrogenase.
  
  
 0.534
SFP15254.1
N-methylhydantoinase A.
     
 0.506
SFP15288.1
N-methylhydantoinase B.
       0.497
SFP15385.1
Glycine/D-amino acid oxidase.
     
 0.497
GltB
Glutamate synthase (NADPH) large subunit.
     
 0.493
SFN87600.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
 
  0.405
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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