STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP15422.1LysR family transcriptional regulator, glycine cleavage system transcriptional activator. (304 aa)    
Predicted Functional Partners:
SFP15385.1
Glycine/D-amino acid oxidase.
 
    0.756
SFP15288.1
N-methylhydantoinase B.
 
     0.746
SFP15254.1
N-methylhydantoinase A.
 
     0.702
SFP15351.1
Uronate dehydrogenase.
 
     0.700
SFP15322.1
Aspartate aminotransferase.
  
    0.583
SFP15226.1
Acetolactate synthase-1/2/3 large subunit.
     
 0.580
SFN87459.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.561
SFP28345.1
DNA-binding transcriptional regulator, LysR family.
  
     0.542
SFP18939.1
LysR substrate binding domain-containing protein.
  
     0.539
SFP19188.1
LysR substrate binding domain-containing protein.
  
     0.537
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.