STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHM53067.1Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (87 aa)    
Predicted Functional Partners:
KHM53066.1
Toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
KHM51956.1
Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.936
KHM52343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
KHM52257.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.761
KHM53068.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.752
KHM52699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.735
KHM51589.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.721
KHM53071.1
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.687
KHM53069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.604
KHM51954.1
Toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.578
Your Current Organism:
Anaerovibrio lipolyticus
NCBI taxonomy Id: 82374
Other names: A. lipolyticus, ATCC 33276, Anaerovibrio lipolytica, CIP 105407, DSM 3074, VPI 7553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.