Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KHM52435.1 | KHM52439.1 | NZ47_04890 | NZ47_04895 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
KHM52435.1 | queF | NZ47_04890 | NZ47_04885 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.710 |
KHM52439.1 | KHM52435.1 | NZ47_04895 | NZ47_04890 | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
KHM52439.1 | KHM52440.1 | NZ47_04895 | NZ47_04900 | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
KHM52439.1 | KHM52441.1 | NZ47_04895 | NZ47_04905 | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
KHM52439.1 | queF | NZ47_04895 | NZ47_04885 | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.409 |
KHM52440.1 | KHM52439.1 | NZ47_04900 | NZ47_04895 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
KHM52440.1 | KHM52441.1 | NZ47_04900 | NZ47_04905 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.889 |
KHM52441.1 | KHM52439.1 | NZ47_04905 | NZ47_04895 | C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
KHM52441.1 | KHM52440.1 | NZ47_04905 | NZ47_04900 | C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.889 |
queF | KHM52435.1 | NZ47_04885 | NZ47_04890 | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.710 |
queF | KHM52439.1 | NZ47_04885 | NZ47_04895 | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |