STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHM51437.1Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
KHM52864.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.852
KHM51438.1
Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
KHM51395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.785
KHM51351.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.756
KHM52042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
KHM51738.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
KHM52827.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
KHM50509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.710
KHM53112.1
Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.707
KHM51252.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.706
Your Current Organism:
Anaerovibrio lipolyticus
NCBI taxonomy Id: 82374
Other names: A. lipolyticus, ATCC 33276, Anaerovibrio lipolytica, CIP 105407, DSM 3074, VPI 7553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.