Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KHM51387.1 | KHM52105.1 | NZ47_10825 | NZ47_06660 | Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.479 |
KHM51387.1 | KHM52507.1 | NZ47_10825 | NZ47_04275 | Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
KHM51387.1 | KHM52719.1 | NZ47_10825 | NZ47_02995 | Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.504 |
KHM52105.1 | KHM51387.1 | NZ47_06660 | NZ47_10825 | CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.479 |
KHM52507.1 | KHM51387.1 | NZ47_04275 | NZ47_10825 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
KHM52719.1 | KHM51387.1 | NZ47_02995 | NZ47_10825 | Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |