STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araP_1L-arabinose transport system permease protein AraP. (350 aa)    
Predicted Functional Partners:
lacG_1
Lactose transport system permease protein LacG.
 
 0.976
araN_1
Putative arabinose-binding protein precursor.
 
 
 0.934
malG
Maltose transport system permease protein MalG.
 
 
 0.904
araQ_2
L-arabinose transport system permease protein AraQ.
 
 0.867
sugB_4
Trehalose transport system permease protein SugB.
 
 0.862
lacG_3
Lactose transport system permease protein LacG.
 
 
 0.860
araQ_5
L-arabinose transport system permease protein AraQ.
 
 0.847
araQ_3
L-arabinose transport system permease protein AraQ.
 
 0.844
bglB_1
Beta-glucosidase B.
 
  
 0.837
araQ_9
L-arabinose transport system permease protein AraQ.
 
 0.831
Your Current Organism:
Microbacterium oxydans
NCBI taxonomy Id: 82380
Other names: Brevibacterium oxydans, CIP 66.12, DSM 20578, IFO 15586, JCM 12414, LMG 23389, LMG:23389, M. oxydans, Microbacterium sp. W702, NBRC 15586, NCIB 9944, NCIB:9944, NCIMB 9944, NCTC 13564, VKM Ac-2116, VKM:Ac:2116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.