Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL30170.1 | budC_1 | RS83_00920 | RS83_00360 | Hypothetical protein. | Diacetyl reductase [(S)-acetoin forming]. | 0.580 |
KJL30170.1 | eryA | RS83_00920 | RS83_01864 | Hypothetical protein. | Erythronolide synthase, modules 1 and 2. | 0.582 |
KJL30170.1 | fabG_1 | RS83_00920 | RS83_00358 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.520 |
KJL30608.1 | budC_1 | RS83_00677 | RS83_00360 | Bacterial alpha-L-rhamnosidase. | Diacetyl reductase [(S)-acetoin forming]. | 0.520 |
KJL30608.1 | eryA | RS83_00677 | RS83_01864 | Bacterial alpha-L-rhamnosidase. | Erythronolide synthase, modules 1 and 2. | 0.582 |
KJL30608.1 | fabG_1 | RS83_00677 | RS83_00358 | Bacterial alpha-L-rhamnosidase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.520 |
KJL32083.1 | budC_1 | RS83_00357 | RS83_00360 | Hypothetical protein. | Diacetyl reductase [(S)-acetoin forming]. | 0.868 |
KJL32083.1 | fabG_1 | RS83_00357 | RS83_00358 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.836 |
KJL32083.1 | mcbR_1 | RS83_00357 | RS83_00356 | Hypothetical protein. | HTH-type transcriptional regulator McbR. | 0.688 |
KJL32083.1 | mdlA | RS83_00357 | RS83_00359 | Hypothetical protein. | Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.893 |
KJL32083.1 | sdh_1 | RS83_00357 | RS83_00355 | Hypothetical protein. | Serine 3-dehydrogenase. | 0.530 |
budC_1 | KJL30170.1 | RS83_00360 | RS83_00920 | Diacetyl reductase [(S)-acetoin forming]. | Hypothetical protein. | 0.580 |
budC_1 | KJL30608.1 | RS83_00360 | RS83_00677 | Diacetyl reductase [(S)-acetoin forming]. | Bacterial alpha-L-rhamnosidase. | 0.520 |
budC_1 | KJL32083.1 | RS83_00360 | RS83_00357 | Diacetyl reductase [(S)-acetoin forming]. | Hypothetical protein. | 0.868 |
budC_1 | eryA | RS83_00360 | RS83_01864 | Diacetyl reductase [(S)-acetoin forming]. | Erythronolide synthase, modules 1 and 2. | 0.847 |
budC_1 | fabD | RS83_00360 | RS83_02806 | Diacetyl reductase [(S)-acetoin forming]. | Malonyl CoA-acyl carrier protein transacylase. | 0.597 |
budC_1 | fabF | RS83_00360 | RS83_02803 | Diacetyl reductase [(S)-acetoin forming]. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.635 |
budC_1 | fabG_1 | RS83_00360 | RS83_00358 | Diacetyl reductase [(S)-acetoin forming]. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.831 |
budC_1 | mcbR_1 | RS83_00360 | RS83_00356 | Diacetyl reductase [(S)-acetoin forming]. | HTH-type transcriptional regulator McbR. | 0.547 |
budC_1 | mdlA | RS83_00360 | RS83_00359 | Diacetyl reductase [(S)-acetoin forming]. | Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.818 |
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