STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfTInner membrane ABC transporter permease protein YtfT. (358 aa)    
Predicted Functional Partners:
araG_2
Arabinose import ATP-binding protein AraG.
 0.997
ytfQ
ABC transporter periplasmic-binding protein YtfQ precursor.
 
 0.996
araG_1
Arabinose import ATP-binding protein AraG.
 0.993
yjfF
Inner membrane ABC transporter permease protein YjfF.
 
  
 
0.984
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.909
lacF_4
Lactose transport system permease protein LacF.
  
 
  0.906
lacG_2
Lactose transport system permease protein LacG.
  
 
  0.905
xylG
Xylose import ATP-binding protein XylG.
 
 0.902
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.894
alsB
D-allose-binding periplasmic protein precursor.
 
 0.891
Your Current Organism:
Microbacterium oxydans
NCBI taxonomy Id: 82380
Other names: Brevibacterium oxydans, CIP 66.12, DSM 20578, IFO 15586, JCM 12414, LMG 23389, LMG:23389, M. oxydans, Microbacterium sp. W702, NBRC 15586, NCIB 9944, NCIB:9944, NCIMB 9944, NCTC 13564, VKM Ac-2116, VKM:Ac:2116
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