Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJL29170.1 | kynA | RS83_01796 | RS83_01483 | Putative cyclase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.681 |
| KJL29170.1 | kynU_1 | RS83_01796 | RS83_01485 | Putative cyclase. | Kynureninase. | 0.905 |
| KJL29913.1 | kynA | RS83_01484 | RS83_01483 | Hypothetical protein. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.863 |
| KJL29913.1 | kynU_1 | RS83_01484 | RS83_01485 | Hypothetical protein. | Kynureninase. | 0.882 |
| KJL29913.1 | paaX | RS83_01484 | RS83_01486 | Hypothetical protein. | Transcriptional repressor PaaX. | 0.838 |
| KJL29913.1 | ybdK_2 | RS83_01484 | RS83_01482 | Hypothetical protein. | Carboxylate-amine ligase YbdK. | 0.548 |
| KJL30559.1 | kynU_1 | RS83_00628 | RS83_01485 | Amidohydrolase. | Kynureninase. | 0.550 |
| dapC | kynA | RS83_03505 | RS83_01483 | Putative N-succinyldiaminopimelate aminotransferase DapC. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.565 |
| dapC | kynU_1 | RS83_03505 | RS83_01485 | Putative N-succinyldiaminopimelate aminotransferase DapC. | Kynureninase. | 0.567 |
| kynA | KJL29170.1 | RS83_01483 | RS83_01796 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Putative cyclase. | 0.681 |
| kynA | KJL29913.1 | RS83_01483 | RS83_01484 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Hypothetical protein. | 0.863 |
| kynA | dapC | RS83_01483 | RS83_03505 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Putative N-succinyldiaminopimelate aminotransferase DapC. | 0.565 |
| kynA | kynU_1 | RS83_01483 | RS83_01485 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Kynureninase. | 0.990 |
| kynA | paaX | RS83_01483 | RS83_01486 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Transcriptional repressor PaaX. | 0.884 |
| kynA | ybdK_2 | RS83_01483 | RS83_01482 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Carboxylate-amine ligase YbdK. | 0.538 |
| kynU_1 | KJL29170.1 | RS83_01485 | RS83_01796 | Kynureninase. | Putative cyclase. | 0.905 |
| kynU_1 | KJL29913.1 | RS83_01485 | RS83_01484 | Kynureninase. | Hypothetical protein. | 0.882 |
| kynU_1 | KJL30559.1 | RS83_01485 | RS83_00628 | Kynureninase. | Amidohydrolase. | 0.550 |
| kynU_1 | dapC | RS83_01485 | RS83_03505 | Kynureninase. | Putative N-succinyldiaminopimelate aminotransferase DapC. | 0.567 |
| kynU_1 | kynA | RS83_01485 | RS83_01483 | Kynureninase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.990 |
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